Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKWIYVVLVLSIAGIGGFSVHAASSAHEKHLNVSKMNVDDEFKDTDGTFILHDLQKDQTFVYNRKRANQRQTPQSTFKVVNALIGLQVKAVRDEYDVKRWDGVKREFESWNRDHTLGSAMRESAIWYYQALARDIGEERMKTWLHTLSYGNEDISGGIDQFWLQSSLTISPLEQETFLEKLAKEELPFDKPVMKIVKRMMIQEEGDHYTLYGKTGTRLTDMGLGWFVGFIKTEHGSYVFVTNVDD---SGTKAKNITVDILKKYGLITS
1XA1 Chain:C ((26-253))------------------------------------------FGSNSGSFVMYSMKKDKYYIYNEKESRKRYSPNSTYKIYLAMFGLDRHIIN-ENSRMSW-HKHYPFDAWNKEQDLNTAMQNSVNWYFERISDQIPKNYTATQLKQLNYGNKNL-GSYKSYWMEDSLKISNLEQVIVFKNMMEQNNHFSKKAKNQLSSSLLIKKNEKYELYGKTGTGIV-YNNGWFVGYVITNHDKYYFATHLSDGKPSGKNAELISEKILKEMGVLN-


General information:
TITO was launched using:
RESULT:

Template: 1XA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1170 -107347 -91.75 -487.94
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain C : 0.75

3D Compatibility (PKB) : -91.75
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_1XA1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XA1-query.scw
PDB file : Tito_Scwrl_1XA1.pdb: