Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEIGDDRGR---IDLVNPEILEKSGEQTGI-EGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
3O3J Chain:A ((2-148))----EIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMT-------------


General information:
TITO was launched using:
RESULT:

Template: 3O3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 676 -68351 -101.11 -477.98
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -101.11
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_3O3J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O3J-query.scw
PDB file : Tito_Scwrl_3O3J.pdb: