Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGD-----RPGITTSQQWVKVGKELE--------LLDTPGILWPKFEDELVG-LRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM
4HNT Chain:B ((691-757))------------------------------------------------------------------------------------------------------------------------------------------KISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4HNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 128 -19934 -155.73 -376.10
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain B : 0.58

3D Compatibility (PKB) : -155.73
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.649

(partial model without unconserved sides chains):
PDB file : Tito_4HNT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HNT-query.scw
PDB file : Tito_Scwrl_4HNT.pdb: