Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGY-NNAVGAGTGIVIDPNGVVLTNNHVIAGAT-----------DINAFSVGSG--QTYGVDVVGYDRTQDVAVLQLRGA-GGLPSAAIGG--GVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNN-------GNGARVQRVVGSAPAASLGIST-----------GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 4IC6 Chain:A ((115-448)) | -----------------------------------------------TEGRIVQLFEKNTYSVVNIFDVTLRP----GNGSGVVWDGQGYIVTNYHVIGNALSRNPSPGDVVGRVNI-LASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGNPFG--FDHTLTVGVISGLNRDIFSQTG-----VTIGGGIQTDAAINPGNAGGPLLDSKGNLIGINTAIFTQTG-TSAGVGFAIPSSTVLKIVPQLIQFSKVL------RAGINIELAPDPVANQLNVRNGALVLQVPGKSLAEKAGLHPTSRGFAGNIVLGDIIVAVDDKPVKNKAELMKILDEYSVGDKVTLKIKRGNEDL-ELKISLEEKSS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142609 for 2415 contacts (-59.1/contact) +
2D Compatibility (PS) -31870 + (NN) -15698 + (LL) 4488
1D Compatibility (HY) -16400 + (ID) 4150
Total energy: -206239.0 ( -85.40 by residue)
QMean score : 0.496
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