Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAVALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDECGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY-PFMTPIFGEGVVFDASPERRK--EMLHNAALRGEQMKGHAATIEDQVRRMIADWGE----AGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG-RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG--HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED---------------LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPES-YRNDHSKMVVQLAQPACVRYRRRTGV |
| 4UYM Chain:A ((2-470)) | ----TPPVVFHWFPFIGSTISYGIDPYKFFFDCRAKYGDIFTFILLGKKTTVYLGTKGNDFILNGKLRDVCAEEVYSPLTTPVFGRHVVYDCPNAKLMEQKKFVKYGLTSDALRSYVPLITDEVESFVKNSPAFQGHKGVFDVCKTIAEITIYTASRSLQGKEVRSKFDSTFAELYHNLDMGFAPINFMLPWAPLPHNRKRDAAQRKLTETYMEIIKARRQAGS-KKDSEDMVWNLMSCVYKNGT-PVPDEEIAHMMIALLMAGQHSSSSTASWIVLRLATRPDIMEELYQEQIRVLGSDLPPLTYDNLQKLDLHAKVIKETLRLHAPIHSIIRAVKNPMAVDGTSYVIPTSHNVLSSPGVTARSEEHFPNPLEWNPHRWDENIAASAEDDEKVDYGYGLVSKGTNSPYLPFGAGRHRCIGEQFAYLQLGTITAVLVRLFRFRNLPGVDGIPDTDYSSLFSKPLGRSFVEFEKRH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251893 for 3646 contacts (-69.1/contact) +
2D Compatibility (PS) -47699 + (NN) -25572 + (LL) 448
1D Compatibility (HY) -32400 + (ID) 6550
Total energy: -363666.0 ( -99.74 by residue)
QMean score : 0.657
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