Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVL--HQNPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGT-GDYGRANDIAVVWSPTG-VPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVLA |
4ZBE Chain:A ((4-238)) | -------------------------------------------VAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAG----LTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVW-PTGRAPIVLAVYT---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109400 for 1958 contacts (-55.9/contact) +
2D Compatibility (PS) -25053 + (NN) -14655 + (LL) 4704
1D Compatibility (HY) -19200 + (ID) 6000
Total energy: -169604.0 ( -86.62 by residue)
QMean score : 0.552
|
|
|