Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATQSPPEPAPDRVRLAGCPLAGTPDVGLTAQDATTALGVPTRRRASSGGIPVATSMWRDAQTVRTYGPAVAKALALRVAGKARSRLTGRHCRKFMQLT----DFDPFDPAIAADPYPHYRELLA---GERVQYNPKRDVYILSRYADVREAARN----HDTLSSARGVTFSRGWLPF-LPTSDPPAHTRMRKQLAPGMARGALETWRPMVDQLARELVGGLLT--QTPADVVSTVAAPMPMRAITSVLGVDGPDEAAFCRLSNQAVRITDVALSASGLISLVQGFAGFRRLRALFTHRRDNGLLRECTVLGKLATHAEQG-RLSDDELFFFAVLLLVAGYESTAHMISTLFLTLADYPDQLTLLAQQPDLIPSAIEEHLRFISPIQNICRTTRVD-YSVGQAVIPAGSLVLLAWGAANRDPRQYEDPDVFRADRNPVGHLAFGSGIHLCPGTQLARMEGQAILREIVANIDRIEVVEPP---TWTTNANLRGLTRLRVAVTPRVAP |
| 2VZM Chain:A ((32-421)) | ----------------------------------------------------------------------------------------------------PPVLDLGALGQDFAADPYPTYARLRAEGPAHRVRTPEGNEVWLVVGYDRARAVLADPRFSKDWRNSTTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRAAF-RVWTDAFVFPDDPAQAQTAMAEMSGYLS----RLIDSKRGQDG---EDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKAL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202264 for 2998 contacts (-67.5/contact) +
2D Compatibility (PS) -40030 + (NN) -23751 + (LL) 7620
1D Compatibility (HY) -26000 + (ID) 6300
Total energy: -290725.0 ( -96.97 by residue)
QMean score : 0.496
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