Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAG-VDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLNTERT
3NV7 Chain:A ((6-150))
----IYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLAYLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEI-------------
General information:
TITO was launched using:
RESULT:
Template:
3NV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91161 for 864 contacts (-105.5/contact) +
2D Compatibility (PS) -15881 + (NN) -9898 + (LL) 1056
1D Compatibility (HY) -13600 + (ID) 2600
Total energy: -132084.0 ( -152.88 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3NV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NV7-query.scw
PDB file :
Tito_Scwrl_3NV7.pdb
: