Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDL-----GARRFHATGEVLPDSVVAELRNH-DAILLGAIGDPSVPSGVLERGLLLRLRFELDHHINLRPARLYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAIRVGTPNEVATEVSVNTAFGVRRVVADAFERARRRRK-------------HLTLVHKTNVLTFAGGLW---LRTVDEVGECYPDVEVAYQHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLSHLGEHDAAARVDRAVEAHLATRGSERLATSDVGERIAAAL |
3TY4 Chain:A ((13-348)) | --LGLIPADGIGKEVVPAARRLMENL-PAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYSSPIVA-LRKKMGLYANVRPVKSLDGA----KGKP-VDLVIVRENTECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGD---NFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAADIYTAVDKVL-TEG--KVLTPDLG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163649 for 2574 contacts (-63.6/contact) +
2D Compatibility (PS) -34708 + (NN) -23105 + (LL) 2076
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -248036.0 ( -96.36 by residue)
QMean score : 0.437
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