Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSRAPRNLAVSSPSAQVTGRMVQNGENLFQFRREGPQVQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAVKDIEALKTGAIGYEPA--DITDEEQTLRVVDAATAWHGRLHGVVHCAGGSQTIGPITQIDSQAWRRTVDLNVNGTMYVLKHAARELV-RGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHMMKLAADELGPSWVRVNSIRPGLIRTDLVVPVTESPELSADYRVCTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSPMLEPVFGADGLRGVVG |
1WNT Chain:C ((1-240)) | --------------------------------------MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ-------ADLDSLVRECPGIEPVCVDLGDWEATERALGSV----GPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164654 for 2028 contacts (-81.2/contact) +
2D Compatibility (PS) -24872 + (NN) -7725 + (LL) 4132
1D Compatibility (HY) -12800 + (ID) 3950
Total energy: -209869.0 ( -103.49 by residue)
QMean score : 0.522
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