Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSGIQQNTLMDNDPLAHGYYVADLLVALAVVVLMLRARRTRPELARMLLLG-----TLIGLVWELPVFGLSAWTNTPIIEWATPLPLPTVVFLLAHSVW-DGPLLTMGWLLARALTGEPAGALGLTVQVLWGQLTALAVELSAILAGTWSYVDDLWFNPVMFWFRGHPVTAAMQLTWLLAPLCFAALVRRLALTAR--
2XI5 Chain:A ((1-184))
---GMDYQEYQQFLARINTARDACVAKDIDVDLLMARHDYFGRELCKSLNIEYRNDVPFIDIILDIRPEVDPLTIDAPHITPDNYLYINNVLYIIDYKVSVSNESSVITYDKYYELTRDISDRLSIPIEIVIIRIDPVSRDLHINS------------DRFKELYPTIVVDINFNQFFDLKQLLYEKFGDDEEFLLKVA
General information:
TITO was launched using:
RESULT:
Template:
2XI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165127 for 1239 contacts (-133.3/contact) +
2D Compatibility (PS) -18636 + (NN) -3083 + (LL) 1104
1D Compatibility (HY) -7600 + (ID) 1100
Total energy: -194442.0 ( -156.93 by residue)
QMean score : 0.147
(partial model without unconserved sides chains):
PDB file :
Tito_2XI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XI5-query.scw
PDB file :
Tito_Scwrl_2XI5.pdb
: