Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------MRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARY---DPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIANTRLVTQNVDDLHERAG--SRDVLHLHGSLHAPRCATCAAAYRDALPDSVEPEEGRRIEPPRCPACGGQVRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRT-------RHPREHCLVGPAGEVLPELLRRAFPG----
1ICI Chain:A ((1-256))
GSHHHHHHGSHMD-EKLLKTIAESKYLVALTGAGVSAESGIPTFR----GKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGSR--NVIHLHGSLRVVRCTS--CNNSFEVESAP-KIP----PLPKCDKCGSLLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDE---TPLTPIA----DYSLRGKAGEVMDELVRHVR--KALS
General information:
TITO was launched using:
RESULT:
Template:
1ICI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134943 for 1876 contacts (-71.9/contact) +
2D Compatibility (PS) -25015 + (NN) -17420 + (LL) 1024
1D Compatibility (HY) -15600 + (ID) 5300
Total energy: -197254.0 ( -105.15 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1ICI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ICI-query.scw
PDB file :
Tito_Scwrl_1ICI.pdb
: