Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
4UT5 Chain:B ((1-114))
-ATQGVFTLPANTRFGVTAFANSSATQTVKVLVNNETAATFTGQSTNNAVIGSQVLNSGGGGKVQIQVSVNGRSSDLVSAQVILANELNVALVGSEDSTDNDYNDAVVVINWPLG
General information:
TITO was launched using:
RESULT:
Template:
4UT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43330 for 842 contacts (-51.5/contact) +
2D Compatibility (PS) -13070 + (NN) -11372 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 5150
Total energy: -86714.0 ( -102.99 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_4UT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UT5-query.scw
PDB file :
Tito_Scwrl_4UT5.pdb
: