Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGLLDLLEIRKAYG---DTRVLEGVALSLAPGEVVSLLGPSGCGKSTLLRIAAGLDDDFQGTVERNPILGFGPDGENGRS-------GGIGVVFQEPRLLPWLTVAQNVGFA--DGWLEDEHWVERLLADVGLA---------------GCGGLLPKQLSGGMAQRAAIARGLYGRPQVLLLDEPFSAVDAFTRMRLQDLLQDVVQNYEISVLLVTHDLDEAFYLADRVLLMGGRPGHIRREFHVPLARPRDRRAVELAYLRGEALTEMQRAHVL |
| 4AYX Chain:A ((340-543)) | --GALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL--------DGHDIRQLNPVWLRSKIGTVSQEPILFSC-SIAENIAYGADDPSSVTAEEIQRV-AEVANAVAFIRNFPQGFNTVVGEKGVL---LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGR--TVLVIAHRLS------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94433 for 1280 contacts (-73.8/contact) +
2D Compatibility (PS) -19323 + (NN) -7673 + (LL) 5508
1D Compatibility (HY) -12800 + (ID) 3450
Total energy: -132171.0 ( -103.26 by residue)
QMean score : 0.452
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