Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVG--VALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFP-PSADPLRQLARYIVERRN |
2J1P Chain:A ((15-292)) | ---SYIIRKADSVNKALDSAVP-L-REPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDIS--LDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGS-DEEIERLRKFARCIGLLFQVVDDILDVTK----------------KLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135623 for 2279 contacts (-59.5/contact) +
2D Compatibility (PS) -30853 + (NN) -34269 + (LL) 1444
1D Compatibility (HY) -22400 + (ID) 6150
Total energy: -227851.0 ( -99.98 by residue)
QMean score : 0.557
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