Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------MVNMSFNCGIVGLPNIGKSTLFNALTQSSAAEAANYPFCTIEPNIGKVPIRDQRLRQIAAIAGSEKVIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFMDDGVNHVHNEIDPISDAEVVEMELILADIDSIEKRLPQLEKKAKQGNKELKRQLDLMHEVLATLKLGKPARSLECSDRNEMKSLQLLTAKPVMYVCNVEDINIITGNKLSQKVKKIAEENKNKFYCISAKLESDIANLESEEEKQSFLSEFGL-----QESGLDGVARIMYEVLSMITFFTVGLKEARAW--PIKI---GSTADKAAGVIHNDFEKGFIKAETISFADYVKYRSESACKDAGKIRFEGKDYIVQDGDIMHFRFNV |
| 4A9A Chain:B ((2-369)) | STTVEKIKAIEDEMARTQKNKATSFHLGQLKAKLAKLRRELLTSASSGSGGGAGIGFDVARTGVASVGFVGFPSVGKSTLLSKLTGTES-----------ETTLVTVP-------------GVIRYKGAKIQMLDLPGIIDG-------GKQVIAVARTCNLLFIILD------------VNKPLHHKQIIEKELEGVGI-RLNKTPPDILIKKKEKG------------------------GISITNTVPLTHLGNDEIRAVMSEYRINSAEIAFRCDATVDDLIDVLEASSRRYMPAIYVLNKIDSLSIEELELLYRIPNAVPISSGQDWNLDELLQVMWDRLNLVRIYTKPKGQIPDFTDPVVLRSDRCSVKDFCNQIHKSLVDDF---------RNALVYGSSVKHQPQYV---GLSHILEDEDVVTILKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87484 for 2071 contacts (-42.2/contact) +
2D Compatibility (PS) -30420 + (NN) -3969 + (LL) 6744
1D Compatibility (HY) -14400 + (ID) 2750
Total energy: -132279.0 ( -63.87 by residue)
QMean score : 0.326
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