Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFANKILTEKDTDQIRFSILASGSSG-------------------------NATLVETGDQKILIDCGLSGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLGVLARK--YKLPIYANAKTWKAMDNMIGEVSSDQK-FQFDMETVKNFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAG--ADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI |
| 3G1P Chain:A ((2-246)) | -------------SLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDLA-----D--RWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGC-DDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSK-LTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRAD--------------APRNHCDLNTVLALNQVI---RSPRVILTHISHQFDAW------LMENALPSGFEVGFDG---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85906 for 1785 contacts (-48.1/contact) +
2D Compatibility (PS) -22989 + (NN) -3179 + (LL) 4928
1D Compatibility (HY) -10800 + (ID) 1800
Total energy: -119746.0 ( -67.08 by residue)
QMean score : 0.350
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