Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRLEIVDSKLRQAKKTEEYFNAIRTNIQFSGKENKILAITSVREGEGKSTTSTSLALSLAQAGFKTLLIDADTRNSVMSGTFKAT----GTIKGLTNYLSGNADLGDIICETNVPRLMVVPSGKVPPNPTALL-------QNAYFNKMIEAIKNIFDYIIIDTPPIGLVVDAAIIANACDGFILVTQAGRIKRNYVEKAKEQMEQS------GSKFLGIILNKVNESVATYGDYGDYGNYGKRDRKRK
2OZE Chain:A ((36-226))
----------------------------------AIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT-LTKDLAKTFKVELPRVNFYEGLKNG-NLASSIVH-LTDNLDLIPGTFDLMLLPKLTRSWTFENESRLLATLLAPLKSDYDLIIIDTVPTPS-VYTNNAIVASDYVMIPLQAEEESTNNIQNYISYLIDLQEQFNPGLDMIGFVPYLVDTDSATIKSNLEELYKQHKEDNLV
General information:
TITO was launched using:
RESULT:
Template:
2OZE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106316 for 1394 contacts (-76.3/contact) +
2D Compatibility (PS) -18672 + (NN) -7365 + (LL) 3492
1D Compatibility (HY) -8400 + (ID) 1800
Total energy: -139061.0 ( -99.76 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2OZE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OZE-query.scw
PDB file :
Tito_Scwrl_2OZE.pdb
: