Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLAVLGTGMIVKE-VLPVLQKIEGIDLVAILSTVRSLETAKDLAKEYNMSLATSEYKAVLDNEEIDTVYIGLPNHLHFDYAKEALLAGKHVICEKPFTLEASQLEELVSIANTRQLILLEAITNQYLPNFDLVKEHLS--NLGDIKIVECNYSQYSSRYDAFKRGEIAPAF-NPEMGGGALRDLNIYNLHLVIGLFGEPITAQYLPNIE---RGIDTSGVLVLDYGHFKTVCIGAKDCSA-EVKSTIQGDKGSIAILGPTNTMPKISLTMN-----------GQ--------ESHVYQLNGDRHRMHDEFVIFEGIISNLDFKRAAQALEHSRTVMKVLDMVTK |
| 3KUX Chain:A ((8-338)) | IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVHA---DWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVYFESHFDRYRPEI-------RQRWREQ---GGGIWYDLGPHLLDQALQLFGLPETLNVDLGMLRPGSQSVDYFHAVLSYPGQRVVLHSTVLAAAETARYIVHGTQGSYIKFGVDPQEDRLKAGERLPQADWGYDMRDGIVTLSHDNVLTEKPLLTLPGNYPAYYAGIRDAIWGTAPN--PVPATEAIKVMELIELGIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183558 for 2421 contacts (-75.8/contact) +
2D Compatibility (PS) -31872 + (NN) -10079 + (LL) 1388
1D Compatibility (HY) -6800 + (ID) 3300
Total energy: -234221.0 ( -96.75 by residue)
QMean score : 0.403
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