Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP------RLEDWLDTLSLYQHTLH-ENTYLVAHSLGCPAILRFLEHLQLRKQLGGIILVSGFAKSLPT---------------L----QML----------------------------DEFTQGS----------------------F----D------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQID-AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSKETR
4Y7D Chain:A ((33-300))-GPPVLVVHGSPGGH-DAGLA-MARFLVAEGLRAIVVDRPGYFGTPLGSGVTPDEQAELYAALFDALGLAAAGVLCWSGGGPSSYRLAARH--PDRVRALVSVAAVSHRYHFDGEKGAEKVLMGTGLGRRMLQLMAAHTPEKLVSATIAAEGHLSKEHVAERVAQIMADPDKERFTLELAVSANHSGPRKAGFDNDMDQFARIDSLELDRITAPTLVVSGTADSDVDPEFSRFAAAQIAGSELVHLDAGTHLAFWVH-PDSGPVRRRAAELLRA---


General information:
TITO was launched using:
RESULT:

Template: 4Y7D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1044 -136692 -130.93 -755.20
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -130.93
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_4Y7D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y7D-query.scw
PDB file : Tito_Scwrl_4Y7D.pdb: