Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENRNN-MTE-FVLLGLTENPKMQKII--------------FVVFFVIYIITVVG-YVLIVVTITASPSLGSPMYLSLAYL-SFIDACYSSVNTP-------------NLITHSLYGKKAILFNGCMTQVFGE-HFFGGAEGILL-----TVMAYDHYVAICK-PL------HYMTIMNQCVC-ALLMGVVWMGG-------------FLH-AT------IQILFIFQLPFC-GPNVIDH-FMCDLNPLLNLACTDTHML--------ELFIAANSGFICLLN-FALLLVSYVVILCSLRTHSLEARHKALSTCVSHIT--VVILFFVPCIFVYMRPAATLPIDKAVAIFYTMITPMLNPLIYTLKNAQMKNAIRKL-CSRKDISGDK |
| 4KQ7 Chain:A ((2-374)) | ---QSNMTNEMFDLAKLKSGVKNKRISSTDPTGGNRDHLEPFKPGEKRIIADIKGMGVINHIWVTIAPPPPTLSRNDIIIRMYWDGNDYPSVESPIGPFFGQGWDERYNYASLPLSAGPE---NGTGLSCYFAMPFEKGARIEIENQSDRNIDAFYFYVDYLEMAKLPKDMGRFHAWYNHNLTEALPEGETEWGVTGAQKPNTTGERNYVFMETQGKGHFVGINYYVHCPTPMWYGEGDDMWFIDGEKVPSLIGTGTEDFFNTAWCPKEAFSHPYFGYPRVNNDIGWLGRTHVYRFFIEDPIFFE---KSLKGTIEHGSNNNLTLDLSTVAYWYQDSAVALPEAP------TKAQRAPKPFINHVDIHRWRDAWRKSKGNKATLWGNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290800 for 1986 contacts (-146.4/contact) +
2D Compatibility (PS) -31467 + (NN) 5828 + (LL) 1940
1D Compatibility (HY) -400 + (ID) 3100
Total energy: -317999.0 ( -160.12 by residue)
QMean score : 0.144
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