Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQV-VAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDE--IATILKSTLKGLEYLHFMRKIHRDIKAGNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI--GYNCVADIWSLGITSIEMAEGKPPYADI-HPMRAIF---MIPTNPPPTFRKPELWSDDFTDFVKKCLVKNPEQRATATQLLQHPFIKNAKPVSILRDLITEAMEIKAKRHEEQQRELEEEEENSDEDELDSHTMVKTSVESVGTMRATSTMSEGAQTMIEHNSTMLESDLGTMVINSEDEEEEDGTMKRNATSPQVQRPSFMDYFDKQDFKNKSHENCNQNMHEPFPMSKNVFPDNWKVPQDGDFDFLKNLSLEELQMRLKALDPMMEREIEELRQRYTAKRQPILDAMDAKKRRQQNF |
| 4BIE Chain:B ((27-280)) | --------------------------------LGKGTYGIVY-AGRDLSNQVRIAIKEIP-ER----LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--------FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP----EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109501 for 1829 contacts (-59.9/contact) +
2D Compatibility (PS) -24046 + (NN) -11042 + (LL) 17168
1D Compatibility (HY) -18000 + (ID) 4900
Total energy: -150321.0 ( -82.19 by residue)
QMean score : 0.435
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