Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGGGYYVE-YRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDVRSGDYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEKDGRMIFAIPR-EGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGG---KLTGYRHMAQDIVDLVSKRLKKDYGLTFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVELVYSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE |
1Y56 Chain:B ((3-356)) | ----------------PEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQF--NDEANVRVMKRSVELWKKYSEEYGFSFKQTGYLFLLYDDEEV-----KTFKRNIEIQNK--FGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNK------GIIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIKRGTINP-MVIS-FKYGHAYLTQTFHGGIIGGIGYEIGP--TYDLTPTYEFLREVSYYFTKIIPA--LKNLLILRTWAGYYAKTPDSNP---AIGRIEE---L-NDYYIAAGFSGHGFMMAPAVGEMVAELITKGK------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Y56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -56117 for 3061 contacts (-18.3/contact) +
2D Compatibility (PS) -37538 + (NN) -4893 + (LL) 13496
1D Compatibility (HY) -6800 + (ID) 3100
Total energy: -94952.0 ( -31.02 by residue)
QMean score : 0.361
|
|
|