Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKRAF-NPDGLNIIQNNGEFADQSVFHIHFHLIPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF
3O1C Chain:A ((15-121))
-GDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMI-VGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQM--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3O1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53041 for 755 contacts (-70.3/contact) +
2D Compatibility (PS) -11231 + (NN) -4168 + (LL) 2540
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -75250.0 ( -99.67 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_3O1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1C-query.scw
PDB file :
Tito_Scwrl_3O1C.pdb
: