Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPVIKINNLNKVFGDNEVLKDINLEINQGEVVAIIGPSGSGKSTLLRCMNLLEVPTKGQVIFEGNDLTEKGTQVDKLRQKMGMVFQNFNLFPHKKVVDNI------------ILAPKLL-KKDNNDELHKEALSLLDKVGLKEKADVYPNQLSGGQKQRVAIARALAMHPDVILFDEPTSALDPEVVGDVLKVMKDLAKEGMTMVVVTHEMGFAKDVSDKVIFMADGVVVESGTPVEIFEQPQHERTQNFLARVL
3B5J Chain:A ((20-231))-----------------ILDNINLSIKQGEVIGIVGRAGSGKSTLTKLIQRFYIPENGQVLIDGHDLAL--ADPNWLRRQVGVVLQD-NVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAG---------LSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICK-GRTVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPE------------


General information:
TITO was launched using:
RESULT:

Template: 3B5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97613 for 1482 contacts (-65.9/contact) +
2D Compatibility (PS) -20699 + (NN) -1965 + (LL) 2832
1D Compatibility (HY) -18000 + (ID) 4000
Total energy: -139445.0 ( -94.09 by residue)
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_3B5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B5J-query.scw
PDB file : Tito_Scwrl_3B5J.pdb: