Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAGSQHVD--ELHGTLNRFYC--NACHK----SYTKSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFK-GDNLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
4L3O Chain:D ((20-236)) | ------------ERCRRVICLVGAGISTSAGIPDFRS------NLEKYHLPYPEAIFEISYFKKHPEPFFALA-KELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70344 for 1512 contacts (-46.5/contact) +
2D Compatibility (PS) -20837 + (NN) -1223 + (LL) 3080
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -107974.0 ( -71.41 by residue)
QMean score : 0.372
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