Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQLNNIHKSFNDVEVIKGIDLSVEQGEVVTLIGRSGSGKTTLLRMINALEIPTEGTVYVNGKTYTSKDKKSQIEVRKQSGMVFQSYNLFPHKTALENV--------MEGLITVKKLKKDEARGKSLELLEKVGLTHVKDQRPHALSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVNDVLKVIKDLANEGMTMVIVTHEMRFAKEVSNNIVFIHEGMIGEQGAPEEMFNRPKTEELRRFLNVINEE |
2FGK Chain:D ((24-241)) | ---------------ILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPN---WLRRQVGVVLQD-NVLLNRSIIDNISLANPGMSVEKVIYAAKLAG--AHDFISELRE--GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKIC-KGRTVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEP--ESLYSYL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70811 for 1621 contacts (-43.7/contact) +
2D Compatibility (PS) -22645 + (NN) -8772 + (LL) 2448
1D Compatibility (HY) -20000 + (ID) 3950
Total energy: -123730.0 ( -76.33 by residue)
QMean score : 0.480
|
|
|