Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
2OL1 Chain:B ((22-131))
--------------PTRQSPGAAGYDLYSAYDYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLKG---IDIGGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSL------------------
General information:
TITO was launched using:
RESULT:
Template:
2OL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55737 for 699 contacts (-79.7/contact) +
2D Compatibility (PS) -11768 + (NN) -2009 + (LL) 1792
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -76522.0 ( -109.47 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_2OL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OL1-query.scw
PDB file :
Tito_Scwrl_2OL1.pdb
: