Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSDVDTFIFPSMGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREII-RELGGD-ETLVRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG
4MKN Chain:A ((52-262))------------------------------------VDVVVAPPFIYIDYVMQHLDRDKYQLSAQNAWIGGNGAFTGEVSAEQLTDFGVPWVILGHSERRSLFGESNEVVAKKTSHALAAGLGVIACIGETLEQRNSGSVFKVLDAQMDALVD--EVKDWTKVVLAYEPVWAIGTGVVASPEQAQEVHAYLRQYCAKKLGAAVADKLRIIYGGSVSDTNCKDLSKQEDIDGFLVGGASLKGAAFVTICN-------


General information:
TITO was launched using:
RESULT:

Template: 4MKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95032 for 1644 contacts (-57.8/contact) +
2D Compatibility (PS) -22642 + (NN) -7198 + (LL) 2960
1D Compatibility (HY) -16400 + (ID) 3500
Total energy: -141812.0 ( -86.26 by residue)
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_4MKN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MKN-query.scw
PDB file : Tito_Scwrl_4MKN.pdb: