Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGLPMIHKIDQKSNN-VQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQI--RSLKKNPQIVVGTPGRILDHINRRT--LKLDHVETLVLDEADEML---NMGFIDDIETILKEVPAER-QTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAMLKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGRRSGGGSGGGSGSGGGGNRDRRGGGEQRSGGNKGNYSQKSK
3DKP Chain:A ((33-220))-----EYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKF-DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDG--GFRDQLASIFLACTSHKVRRAMFSATF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87550 for 1334 contacts (-65.6/contact) +
2D Compatibility (PS) -18805 + (NN) -5444 + (LL) 16064
1D Compatibility (HY) -17200 + (ID) 3150
Total energy: -116085.0 ( -87.02 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_3DKP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DKP-query.scw
PDB file : Tito_Scwrl_3DKP.pdb: