Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGH--RFKEAGHSDNMGITADNVNLDFTKAQEWKGGVVNKLTSG-VKGLLKKNK-VEMLEGEAFFVDDHSLRV-IHPDSAQTYTFNNVIIATGSRPI--EIPGFKYGKRVLSSTGALALTEVPKKLVVIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETENGVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSNIFAIGDIVPGVPLAHKASYEAKIAAEAIAGEKSENDYTALPAVVFSDPELATVGLTEKEAKEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGLAIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM |
| 4K8D Chain:A ((9-435)) | -------------VIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDG-GIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKESP-YWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARN-TLFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DGEFVLTTTHGE---LRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELA--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205661 for 3613 contacts (-56.9/contact) +
2D Compatibility (PS) -45587 + (NN) -11307 + (LL) 3540
1D Compatibility (HY) -25600 + (ID) 7000
Total energy: -291615.0 ( -80.71 by residue)
QMean score : 0.555
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