Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTEEVRCIGCG----AVIQTEDPDKIGYAPKSSLNNEQVICK-----RCFRLKHYNEIQDVALTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSN--PVLLVGNKEDVLPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPPTEEDMKTLPKLVPYSFTVKEKADIVFSGLGWVTIPEGGAKVTAWVPEGVSATIRTSLV |
1U0L Chain:A ((9-299)) | LRRRGIVVSFHSNMVTVEDEETGERILCKLRGKFRLQNLKIYVGDRVEYTPDETGSGVIENVLHRKNLLTKPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVINKMDLYDEDDLRKVRELEEIYSGL------YPIVKTSAKTGMGIEELKEYL----KGKISTMAGLSGVGKSSLLNAI-----------NPGLKLRTTTTAQLLKFDFGGYVVDTPGF----------ANLEINDIE-PEELKHYFKEFGDKQCFFSDC------------------------NHVDEPECGVKEAVENGEIAESRYENYVKMFYELLGRR------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58422 for 2031 contacts (-28.8/contact) +
2D Compatibility (PS) -28028 + (NN) -773 + (LL) 6904
1D Compatibility (HY) -9600 + (ID) 2450
Total energy: -92369.0 ( -45.48 by residue)
QMean score : 0.299
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