Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNTNLEELRTQVDQLNIDLLELISKRANLVQEIGKIKGTQGSLRFDPLREREMLNTILAANEGPFEDSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNKKEDTIVTVKGLPIGNGEPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYE-KATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHP--DPAVALSDSAQQMDIPEFEEFWNAILASNLVPHKIK |
| 3NVT Chain:A ((32-381)) | -------ELRTQVDQLNIDLLELISKRANLVQEIGKIKG-----RFDPLREREMLNTILAANEGPFEDSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNKKEDTIVTVKGLPIGNGEPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKA-TRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEA--DGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILASNLVP---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -169429 for 2695 contacts (-62.9/contact) +
2D Compatibility (PS) -37352 + (NN) -19581 + (LL) 992
1D Compatibility (HY) -46000 + (ID) 16700
Total energy: -288070.0 ( -106.89 by residue)
QMean score : 0.545
|
|
|