Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVRDVNFSYNGTDAILKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPNSGDVLLEGKSIFEWKAKEFAQNVAIVHQSNVLPNELMVKELLYFGRLPY--KNWRMTRTKEDDLAVERALMQTELTEKAEKFV----DS--------LSGGERQRVFIATALVQDTPILLLDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALMYSDHLIVMKNGEVVAKGEPEELLTTDLIAETYGVVADVLNDANNGKYIVPQRRKEF
4HLU Chain:B ((25-228))
----------------LENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGE---RKKGYEIRRNIGIAFQ---YPEDQFFAERV-FDEVAFAVKNFYPDRD------------PVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKW-KTLGKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFL---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HLU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115978 for 1437 contacts (-80.7/contact) +
2D Compatibility (PS) -21270 + (NN) -7883 + (LL) 4708
1D Compatibility (HY) -16000 + (ID) 3650
Total energy: -160073.0 ( -111.39 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_4HLU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HLU-query.scw
PDB file :
Tito_Scwrl_4HLU.pdb
: