Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDIQKIRADFPILAQEINEKPLAYLDNAATSQKPKQVIEALTHY-YEFDNANVHRGVHTLAARATDAYESARGKVAKFIHAREVAEIIFTRGTTSAINLVVDSYAEANIEAGDE---IVISYLEHHSNLIPWQQLAKRKGAVLKYIELEEDGTISVEQAKKTI--GEKTKIVALAHVSNVLGTITPIKEIAAIAHQFGAVILVDGAQAVPHMEVDVVDLDADFYAFSGHKMMAPTGIGALYGKRELLDAMEPTEFGGEMIDFVELYDSTWKELPWKFEAGTPIIGGAIALGAAIDYLAEVGLENIHAHEQALASYAMEEMSK-IEGITIYGPKDASKRCGLVTFNLEGAHPHDIATILDEDGVAIRAG---HHCAQPLMKWLDVSSTARASFYIYNTKEEIDALIDGLKLTKEYFGL---- |
| 4ISY Chain:A ((12-398)) | ----------------------SAYLDHAATTPMHPAAIEAMAAVQRTIGNAS---SLHTSGRSARRRIEEARELIADKLGAR-PSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDV-TCVPLMHGGGQERDI---------------RSGTPDVASAVGMATAAQIAVD-GLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234033 for 3283 contacts (-71.3/contact) +
2D Compatibility (PS) -39967 + (NN) -13260 + (LL) 4020
1D Compatibility (HY) -10400 + (ID) 4950
Total energy: -298590.0 ( -90.95 by residue)
QMean score : 0.477
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