Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTVKLNNGVEVPILGFGTYQITDA--AEAEHAVKDAIKAGYRHIDTAQSYMNEEAVGRGI----AASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFN---------------------DVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFN---EVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKND---------IFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWMASRKLNV |
| 4JQ2 Chain:B ((6-302)) | -QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFN-HRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRN----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133225 for 2169 contacts (-61.4/contact) +
2D Compatibility (PS) -28330 + (NN) -14883 + (LL) 1972
1D Compatibility (HY) -25600 + (ID) 4850
Total energy: -204916.0 ( -94.47 by residue)
QMean score : 0.607
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