Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFDRSKSHANIGTIGHVDHGKTTLTAAITTVLHKKSGKGTAMAYDQIDGAPEERERGITISTAHVE--------------YETE--------------TRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVVKGSALKALEGDAEWEAKIFELMDAVDEYIPTPERD-TEKPFMMPVEDVFSITGRGT--------VATGRVERGQVKVGDEVEII-GLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQVLAKPGTITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGIIHLPEGVEMVMPGDNTEMNVELISTIAIEEGTRFSIREGGRTVGSGVVSTITE |
| 4RD6 Chain:A ((3-276)) | -----WPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHS-----------------------KLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTW---AENVPIIPVSALHKINIDS--------LIEGIEEYIKTPYRDLSQKPVMLVIRS-FDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRVE-KQGKVSYEPIFTKI--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64086 for 1599 contacts (-40.1/contact) +
2D Compatibility (PS) -24140 + (NN) -5627 + (LL) 10452
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -107401.0 ( -67.17 by residue)
QMean score : 0.346
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