Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQISLGSTVIQAGKKNKDLKKLRKKVGIV--FQFPEHQLFEETVLKDISFGPMNFG-------------VKKEDAEQKAREMLQLVGLSEELLDRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYADEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAALGVRFNEPMLTIEDAAAEIRALFQGEKTL |
1G9X Chain:B ((22-235)) | --------ALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDIT----NKEPAELYH-YGIVRTFQTPQ-PLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSH-LYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKG-ITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEG------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1G9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -119687 for 1486 contacts (-80.5/contact) +
2D Compatibility (PS) -21332 + (NN) -9615 + (LL) 5672
1D Compatibility (HY) -18400 + (ID) 3850
Total energy: -167212.0 ( -112.52 by residue)
QMean score : 0.592
|
|
|