Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEIGDDRGR---IDLVNPEILEKSGEQTGI-EGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
3M6P Chain:B ((2-148))----EIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMT-------------


General information:
TITO was launched using:
RESULT:

Template: 3M6P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 682 -71449 -104.76 -499.64
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -104.76
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3M6P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M6P-query.scw
PDB file : Tito_Scwrl_3M6P.pdb: