Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTLNNISKSYKLGKEEVPILKHINLTVQAGEFLAIMGPSGSGKSTLMNIIGCLDRPTSGTYTLDQIDILKGKDGALAE---IRNESIGFVFQTFHLLPRLTALQNVELP---MIYNKVKKKERRQRAYEALEKV--GLKDRVSYKPPKLSGGQKQRVAIARALVNQPRFILADEPTGALDTKSSEQILALFSELHR--EGKTIIMITHDPDVAKKADRTVFIRDGELVLDERGDISHA
2FGK Chain:D ((8-222))-ITFRNIRFRYK--PDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLID------GHDLALADPNWLRRQ-VGVVLQDNVLLNR-SIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIM---RNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIV----------


General information:
TITO was launched using:
RESULT:

Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 984 -28164 -28.62 -137.38
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -28.62
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_2FGK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FGK-query.scw
PDB file : Tito_Scwrl_2FGK.pdb: