Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREF--NREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT-PKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKD-GL-VDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFA
3O0K Chain:A ((26-282))VPTVKL-NDGNHIPQLGYGVWQI---------SNDEAVSAVSEALKAGYRHIDTATIYGN---EEGVGKAINGSGIARADIFLTTKLWN--------SDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQG-LLED-------------------------------PTLKSIAEKHAKSVAQIILRWHIETGN--IVIPKSITPARIKENFDIFDFTLNGTDHDAITKL--


General information:
TITO was launched using:
RESULT:

Template: 3O0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1381 11458 8.30 45.65
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 8.30
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_3O0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O0K-query.scw
PDB file : Tito_Scwrl_3O0K.pdb: