Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSDDELTGLDEFALLAENAEQAGVNGPLPEVERVQAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGLGEP----ALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLRELAPGAE---FVVGMSLGGLTAIRLAAM-APDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLW----DDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDTR------ |
3C5V Chain:A ((39-376)) | ----RDFSPVPWSQYFESMEDVEVENET-------GKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGR-----PKTFKSLENAIEWSVKSGQIRN--LESARVSMVGQVKQCEPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKF----QMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRFAEPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127281 for 2474 contacts (-51.4/contact) +
2D Compatibility (PS) -29806 + (NN) -15298 + (LL) 1992
1D Compatibility (HY) -13600 + (ID) 2300
Total energy: -186293.0 ( -75.30 by residue)
QMean score : 0.428
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