Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTAAGLSGIDLTDLDNFADGFPHHLFAIHRREAPVYWHRPTEHTPDGEGFWSVATYAETLEVLRDPVTYSSVTGGQRRFGGTVLQDLPVAGQVLNMM--DDPRHTRIRRLVSSGLTPRMIRRVEDDLRRRARGLLDGV------EPGAPFDFVVEIAAELPMQMICILLGVPETDRHWLFEAVEPGFDFRGSRRATMPRLNVEDAGSRLYTYALELIAGKRAEPADDMLSVVANATIDDPDAPALSDAELYLFFHLLFSAGAETTRNSIAGGLLALAENPDQLQTLRSDFELLPTAIEEIVRWTSPSPSKR-RTASRAVSLGGQPIEAGQKVVVWEGSANRDPSVFDRADEFDITRKPNPHLGFGQGVHYCLGANLARLELRVLFEELLSRFGSVRV-VEPAE--WTRSNRHTGIRHLVVELRGG |
| 4UMZ Chain:B ((33-427)) | -------PVLDLGALGQDFAADPYPTYARLRAEGPAHRVR----TPEGNEVWLVVGYDRARAVLADP-RFSK----DWRNSTTPLTEAEAALN-HNMLESDPPRHTRLRKLVAREFT---MRRVEL-LRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRA-AFRVWTDAFVFPDDP------AQAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTS--DEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRR- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -165558 for 3081 contacts (-53.7/contact) +
2D Compatibility (PS) -41844 + (NN) -26728 + (LL) 1616
1D Compatibility (HY) -26800 + (ID) 7300
Total energy: -266614.0 ( -86.53 by residue)
QMean score : 0.459
|
|
|