Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPRHLLTAADLSRDDATAILDDADRFAQALVGRDIKKLPT---LRGRTVVTMFYENSTRTRVSFEVAGKWMSADVINVS-AAGSSVGK-GESLRDTALTLRAAGADALIIRHPASGAAHLLAQWTGAHNDGPAVINAGDGTHEHPTQALLDALTIRQRLGGIEGRRIVIVGDILHSRVARSNVMLLDTL-GAEVVLVAPPTL-LPVGV------TGWPATVSHDFDAELPAADAVLMLRVQAERMNGGFFPSVR-EYSVRYGLTERRQAMLPGHAVVLHPGPMVRGMEITSSVADSSQSAVLQQVSNGVQVRMAVLFHVLVGAQDAGKEGAA |
8AT1 Chain:C ((7-304)) | ---KHIISINDLSRDDLNLVLATAAK---------LKANPQPELLKHKVIASCFFEASTRTRLSFQTSMHRLGASVVGFSDSANTSLGKKGETLADT-ISVISTYVDAIVMRHPQEGAARLATEFSG----NVPVLNAGDGSNQHPTQTLLDLFTIQQTEGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPEYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMK----VLHPLPRVD--EIATDVDKTPHAWYFQQAGNGIFARQALLALVL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 8AT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175434 for 2418 contacts (-72.6/contact) +
2D Compatibility (PS) -31208 + (NN) -15683 + (LL) 1764
1D Compatibility (HY) -19600 + (ID) 5000
Total energy: -245161.0 ( -101.39 by residue)
QMean score : 0.466
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