Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALREPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAH-GADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVH-TEQEADRALKAGAKVIGVNARDLMT---LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDP--RAAVADLVTAGTHPSCPKPAR |
| 1PII Chain:? ((1-255)) | --MQTVLAKIVADKAIWVEARKQQQPLASFQNEVQ--PSTRHFYDALQGARTAFILECKKASPSKGVIRDDFDPARIAAIYKH-YASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFIIDPYQIYLAR-YYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSN-EEEQERAIALGAKVVGINNRDLRDLSI---DLNRTRELAPKLGHNVTVISESGINTYAQVRELSH-FANGFLIGSALMAHD--DLHAAVRRVLLG----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -170408 for 2112 contacts (-80.7/contact) +
2D Compatibility (PS) -26628 + (NN) -9413 + (LL) 552
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -227797.0 ( -107.86 by residue)
QMean score : 0.561
|
|
|