Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDKLHWLAMHGVIRGIAAIGIRRGDLQARLIADPAVATDPVPFYDEVR-----SHGALVRNRANYLTVDHRLAHDLLRSDDFRVVSFGENLPPPLRWLERRTRGDQLHPLREPSLLAVEPPDHTRYRKTVSAVFTSRAVSALRDLVEQTAINLLDRFAEQPGIVDVVGRYCSQLPIVVISEILGVPEHDRPRVLEFGELAAPSL--DIGIPWRQYLRVQQGIRGFDCWLEGHLQQLRHAPGDDLMSQLIQIAESGDNETQLDETELRAIAGLVLVAGFETTVNLLGNGIRMLLDTPEHLATLRQHPELWPNTVEEILRLDSPVQLTARVACRDVEVAGVRIKRGEVVVIYLAAANRDPAVFPDPHRFDIERPNAGRHLAFSTGRHFCLGAALARAEGEVGLRTFFDRFPDVRAAGAGSR---RDTRVLRGWSTLPVTLGPARSMVSP |
4UBS Chain:A ((14-392)) | ---------------------------------------DPPTAYDPLREGRPLSRVSLYDGRSVWVVTGHAAARALL--SDQRLSS-DRTLP---RFPATTERFEAVR-TRRVALLGVDDPEHRTQRRMLVPSFTLKRAAALRPRIQETVDGLLDAMEAQGPPAELVSAFALPLPSMVICALLGVPYADH----DFFESQSRRLLRGPGIAEVQDARAQ-----LDDYLYALIDRKRKEPGDGLLDDLIQ---EQLNRGTVDRAELVSLATLLLIAGHETTANMISLGTFTLLRHPEQLAELRAEPGLMPAAVEELLRFLSIADGLLRVATEDIEVAGTTIRADEGVVFATSVINRDAAGFAEPDALDWHR-SARHHVAFGFGIHQCLGQNLARAEMEIALGTLFERLPGLRLAAPADEIPFKPGDTIQGMLELPVT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196011 for 3011 contacts (-65.1/contact) +
2D Compatibility (PS) -39292 + (NN) -12683 + (LL) 4412
1D Compatibility (HY) -19200 + (ID) 7100
Total energy: -269874.0 ( -89.63 by residue)
QMean score : 0.438
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