Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVL--HQNPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGT-GDYGRANDIAVVWSPTG-VPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVLA |
3RXX Chain:A ((4-238)) | -------------------------------------------VAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAG----LTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVW-PTGRAPIVLAVYT---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113803 for 1955 contacts (-58.2/contact) +
2D Compatibility (PS) -25110 + (NN) -14868 + (LL) 4704
1D Compatibility (HY) -19200 + (ID) 6000
Total energy: -174277.0 ( -89.14 by residue)
QMean score : 0.522
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