Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
2J9C Chain:B ((3-114))
MKKVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERYRGREYIVDLIPKVKIELVVKEEDVDNVIDIICENARTGNPGDGKIFVIPVERVVRVRTKEEGKEAL
General information:
TITO was launched using:
RESULT:
Template:
2J9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63432 for 735 contacts (-86.3/contact) +
2D Compatibility (PS) -12230 + (NN) -2346 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 3100
Total energy: -92708.0 ( -126.13 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2J9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J9C-query.scw
PDB file :
Tito_Scwrl_2J9C.pdb
: