Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MTAESPTIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLRRVEGRVGE--
4RI1 Chain:A ((8-185))
KKNYSYKNIQAIDFTNLNDGEKLLVLEFRNHPNTALWMYS-TFISLKTHLQFIEDLKNSPNHRYFLFKEEGVYLGVGSITKINF----FHKHGYLGIYKNPFLKNGGETILKALEFIAFEEFQLHSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKDKEFIDVLLYYKDKKGYNDQSLLK
General information:
TITO was launched using:
RESULT:
Template:
4RI1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75118 for 1251 contacts (-60.0/contact) +
2D Compatibility (PS) -18562 + (NN) -5499 + (LL) 584
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -108545.0 ( -86.77 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_4RI1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RI1-query.scw
PDB file :
Tito_Scwrl_4RI1.pdb
: