Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------MPVAHRLLFSLTALLAATAQAAVDGQKLYTQGGANPAAAACVTCHGADGMGLAAAGFPRLA------GLPAAYLSKQLHDLKQGGSREHPVMKGIADALGDDEIQALANTLAAMPAPKPVELSRVATPRSPGETLAVRGAWERNIPECVTCHGPAGSGVGEAFPPLQGQGEMYLSNQLRAWQLGTRRNDPNDLMGHIAKSLSEEEIRSVSQFFATLGQAGGQP |
| 3MK7 Chain:C ((1-303)) | MSTFWSGYIALLTLGTIVALFWLIFATRKGESAGTTDQTMGHAFDGIEEYDNPLPRWWFLLFIGTLVFGILYLVLYPGLGNWKGVLPGYEGGWTQEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHGSDAKG--SLGFPNLADQDWRWGGDAASIKTSILNGRIAA------MPAWGQAIGEEGVKNVAAFVRKDLAGLP------LPEGTDADLSAGKNVYAQT---CAVCHGQGGEGMAALGAPKLNSAAGWIYGSSLGQLQQTIRHGRNGQMPAQQQYLGDDKVHLLAAYVYSLSQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27960 for 1448 contacts (-19.3/contact) +
2D Compatibility (PS) -20911 + (NN) -11413 + (LL) 1276
1D Compatibility (HY) -2800 + (ID) 2150
Total energy: -63958.0 ( -44.17 by residue)
QMean score : 0.250
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